xap/pymol: Added.

xap/pymol/doinst.sh

@@ -0,0 +1,3 @@
+if [ -x /usr/bin/update-desktop-database ]; then
+    /usr/bin/update-desktop-database -q usr/share/applications
+fi

xap/pymol/pymol-1.0.tar.gz.sha1

@@ -0,0 +1 @@
+f307167b6276e01bb13b74551e2ca9085df66db5  pymol-1.0.tar.gz

xap/pymol/pymol.SlackBuild

@@ -0,0 +1,118 @@
+#!/bin/bash
+# Build script for Slackware
+# Damien Goutte-Gattat "gouttegd" < damien.goutte-gattat at e.ujf-grenoble.fr >
+#
+# Redistribution and use of this script, with or without modifications, is
+# permitted provided that the following conditions are met:
+#
+# 1. Redistributions of this script must retain the above copyright
+# notice, this list of conditions and the following disclaimer.
+#
+# THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR IMPLIED
+# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
+# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
+# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
+# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
+# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
+# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+#
+# Latest PyMOL sourcecode is available at:
+# http://pymol.sourceforge.net/
+#
+# Depends: l/pmw
+
+# Source package infos
+NAMESRC=${NAMESRC:-pymol}
+VERSION=${VERSION:-1.0}
+ARCHIVE=${ARCHIVE:-$NAMESRC-$VERSION.tar.gz}
+SVN=${SVN:-https://pymol.svn.sourceforge.net/svnroot/pymol/branches/b10/pymol}
+
+# Built package infos
+NAMETGZ=${NAMETGZ:-pymol}
+BUILD=${BUILD:-2GGD}
+ARCH=${ARCH:-i486}
+TARGET=${TARGET:-i486}
+
+# Directories
+TMP=${TMP:-/tmp}
+OUT=${OUT:-$TMP/build}
+PKG=${PKG:-$OUT/$NAMETGZ}
+CWD=$(pwd)
+# Get the "site-packages" directory of the Python installation
+SITEPKG=$(python <<EOF
+#!/usr/bin/python
+import sys
+for p in sys.path:
+    if p[-13:] == 'site-packages':
+        print p
+EOF)
+
+set -e  # Quit if a command returns non-zero
+
+# Sanity checks
+if [ $UID -eq 0 ]; then
+    echo "You should NOT run this script as ROOT!"
+    exit 1
+fi
+if [ ! -d $TMP ]; then
+    echo "$TMP does not exist or is not a directory!"
+    exit 1
+fi
+
+# Get the sources
+if [ -r $ARCHIVE ]; then
+    sha1sum -c $ARCHIVE.sha1
+    tar xf $ARCHIVE -C $TMP
+else
+    svn export $SVN $TMP/$NAMETGZ-$VERSION
+fi
+
+# Compile
+cd $TMP
+echo "Building $NAMETGZ-$VERSION..."
+cd $NAMETGZ-$VERSION
+python setup.py build
+python setup.py install --prefix=$PKG/usr
+
+# Install supplementary data (not installed by the setup.py script)
+mkdir -p $PKG/usr/share/{pymol,applications}
+cp -R data test scripts examples $PKG/usr/share/pymol
+install -m 0644 $CWD/pymol.desktop $PKG/usr/share/applications
+
+# Install the launching script
+mkdir -p $PKG/usr/bin
+cat > $PKG/usr/bin/pymol <<EOF
+#!/bin/sh
+export PYMOL_DATA=/usr/share/pymol/data
+export PYMOL_SCRIPTS=/usr/share/pymol/scripts
+python $SITEPKG/pymol/__init__.py \$*
+EOF
+chmod 755 $PKG/usr/bin/pymol
+
+# Install the documentation
+mkdir -p $PKG/usr/doc/$NAMETGZ-$VERSION
+install -m 644 \
+  AUTHORS COPYING ChangeLog DEVELOPERS INSTALL LICENSE NEWS PACKAGING README \
+  $PKG/usr/doc/$NAMETGZ-$VERSION
+
+# Copy slack-desc and doinst.sh files
+install -D -m 0644 $CWD/slack-desc $PKG/install/slack-desc
+install    -m 0755 $CWD/doinst.sh  $PKG/install/doinst.sh
+
+# Package the tree
+cd $PKG
+mkdir -p $OUT
+PACKAGING="
+chown root:root . -R
+/sbin/makepkg -l y -c n $OUT/$NAMETGZ-$VERSION-$ARCH-$BUILD.tgz
+rm -rf $PKG
+rm -rf $TMP/$NAMETGZ-$VERSION
+"
+if type -p fakeroot ; then
+    echo "$PACKAGING" | fakeroot
+else
+    su -c "$PACKAGING"
+fi

xap/pymol/pymol.desktop

@@ -0,0 +1,10 @@
+[Desktop Entry]
+Name=PyMOL
+Comment=Molecular Visualization Program
+Exec=pymol
+Icon=/usr/share/icons/hicolor/64x64/apps/kalzium.png
+Terminal=false
+Type=Application
+Categories=GNOME;GTK;Qt;KDE;Science
+StartupNotify=false
+GenericName=Molecular Visualization Program

xap/pymol/slack-desc

@@ -0,0 +1,12 @@
+     |-----handy-ruler------------------------------------------------------|
+pymol: pymol (Molecular visualization system)
+pymol: 
+pymol: PyMOL is an open-source molecular visualization system.
+pymol: 
+pymol: 
+pymol: 
+pymol: 
+pymol: 
+pymol: 
+pymol: 
+pymol: