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ap/clustalw: Cleaned up.

slackware-14.2
Damien Goutte-Gattat 12 years ago
parent
commit
2927160756
1 changed files with 27 additions and 22 deletions
  1. +27
    -22
      ap/clustalw/clustalw.SlackBuild

+ 27
- 22
ap/clustalw/clustalw.SlackBuild View File

@ -1,26 +1,29 @@
#!/bin/bash
# Build script for Slackware
# Damien Goutte-Gattat "gouttegd" < damien.goutte-gattat at e.ujf-grenoble.fr >
# Copyright 2008,2009 Damien Goutte-Gattat
#
# Redistribution and use of this script, with or without modifications, is
# permitted provided that the following conditions are met:
# Redistribution and use of this script, with or without modifications,
# is permitted provided that the following conditions are met:
#
# 1. Redistributions of this script must retain the above copyright
# notice, this list of conditions and the following disclaimer.
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR
# IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
# DISCLAIMED. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT,
# INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
# SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
# HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT,
# STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING
# IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
# POSSIBILITY OF SUCH DAMAGE.
#
# Contact: Damien Goutte-Gattat <damien.goutte-gattat@e.ujf-grenoble.fr>
#
# Latest ClustalW sourcecode is available at:
# ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/
# <ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/>.
# Source package infos
NAMESRC=${NAMESRC:-clustalw}
@ -28,11 +31,10 @@ VERSION=${VERSION:-1.83}
ARCHIVE=${ARCHIVE:-$NAMESRC$VERSION.linux.tar.gz}
WGET=${WGET:-ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/$ARCHIVE}
# Built package infos
# Build infos
NAMETGZ=${NAMETGZ:-clustalw}
BUILD=${BUILD:-1GGD}
BUILD=${BUILD:-2GGD}
ARCH=${ARCH:-i486}
TARGET=${TARGET:-i486}
# Directories
TMP=${TMP:-/tmp}
@ -40,7 +42,7 @@ OUT=${OUT:-$TMP/build}
PKG=${PKG:-$OUT/$NAMETGZ}
CWD=$(pwd)
set -e # Quit if a command returns non-zero
set -e
# Sanity checks
if [ $UID -eq 0 ]; then
@ -57,6 +59,9 @@ case "$ARCH" in
i?86)
CPUOPT="-O2 -march=$ARCH -mtune=i686"
;;
x86_64)
CPUOPT="-O2 -fPIC"
;;
*)
CPUOPT="-O2"
;;
@ -64,7 +69,8 @@ esac
# Get and verify the source archive
if [ ! -r $ARCHIVE ]; then
wget "$WGET"
wget -c -O $ARCHIVE.part "$WGET"
mv $ARCHIVE.part $ARCHIVE
fi
sha1sum -c $ARCHIVE.sha1
NAME=$(tar ft $ARCHIVE | head -n 1 | cut -d / -f 1)
@ -87,8 +93,7 @@ install -m 644 \
$PKG/usr/doc/$NAMESRC-$VERSION
# Copy slack-desc file
mkdir -p $PKG/install
install -m 644 $CWD/slack-desc $PKG/install/slack-desc
install -D -m 644 $CWD/slack-desc $PKG/install/slack-desc
# Package the tree
cd $PKG


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