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@ -18,16 +18,39 @@ This plugin extracts an user-specified selection of frames from a |
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hyperstack and generates a new image containing the selected frames |
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disposed in a array. |
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Helper Library |
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-------------- |
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Bundled with the plugins is a small library of helper classes for use in |
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other plugins or scripts. Notable classes include `BatchReader`, to |
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facilitate batch processing of images listed in a CSV input file, and |
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`ChannelMasker`, to facilitate the creation and manipulation of |
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binary masks. Refer to the package´s [Javadoc] |
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(https://incenp.org/dvlpt/imagej-plugins/apidocs/index.html) for more |
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details. |
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Installation |
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------------ |
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Build the plugins with [Maven](https://maven.apache.org/) by running |
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To build the plugins with [Maven](https://maven.apache.org/), first |
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install the parent POM from my own repository by running |
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``` |
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$ mvn dependency:get -DgroupId=org.incenp -DartifactId=incenp-base \ |
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-Dversion=1.1.0 -Dpackaging=pom \ |
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-DremoteRepositories=https://mvn.incenp.org/repo/releases |
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``` |
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You can then build the plugins by running, from the source directory |
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``` |
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$ mvn package |
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``` |
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in the source directory. Then copy the generated JAR file (found in the |
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`target/` folder) to the `plugins` folder of your ImageJ installation. |
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Then copy the generated JAR file (found in the `target/` folder) to the |
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`plugins` folder of your ImageJ installation. |
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(Pre-compiled JAR files are also available for each release on the |
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[releases page](https://git.incenp.org/damien/imagej-plugins/releases) |
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for the project.) |
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Once installed (and after restarting ImageJ if it was already running), |
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the plugins will be available in the `Plugins > Incenp.org` menu. |
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