’s utilities for computational biology.
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Installing Incenp.Bioutils
Installing from PyPI
Packages for Incenp.Bioutils are published on the
`Python Package Index`_ under the name ``incenp.bioutils``. To install
the latest version from PyPI:
.. _Python Package Index:
.. code-block:: console
$ pip install -U incenp.bioutils
Installing from source
You may download a release tarball from the `homepage`_ or from the
`release page`_, and then proceed to a manual installation:
.. _homepage:
.. _release page:
.. code-block:: console
$ tar zxf incenp.bioutils-|version|.tar.gz
$ cd incenp.bioutils-|version|
$ python build
$ python install
You may also clone the repository:
.. code-block:: console
$ git clone
and then proceed as above.
Incenp.Bioutils requires the following Python dependencies to work:
* `Biopython <>`_
* `Click <>`_
* `Click-Shell <>`_
If you install Incenp.Bioutils from the Python Package Index with `pip`
as described above, those dependencies should be automatically installed
if they are not already available on your system.
Testing the installation
You can check whether Incenp.Bioutils has been installed correctly by
trying to invoke one of the command-line utilities it provides:
.. code-block:: console
$ seqtool --version
seqtool |version|
Copyright © 2020 Damien Goutte-Gattat
This program is released under the GNU General Public License.
See the COPYING file or <>